LOCUS Seq1 1104 bp mRNA linear MAM 14-SEP-2021 DEFINITION Opn4, partial CDS. ACCESSION Seq1 VERSION KEYWORDS . SOURCE Eubalaena glacialis (North Atlantic right whale) ORGANISM Eubalaena glacialis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Mysticeti; Balaenidae; Eubalaena. REFERENCE 1 (bases 1 to 1104) AUTHORS Fasick,F.I., Algrain,H., Samuels,C., Mahadevan,P., Schweikert,L.E., Naffaa,Z.J. and Robinson,P.R. TITLE Spectral tuning and deactivation kinetics of marine mammal melanopsins JOURNAL unpublished REFERENCE 2 (bases 1 to 1104) AUTHORS Fasick,J.I., Samuels,C. and Naffaa,Z.J. TITLE Direct Submission JOURNAL Submitted (13-SEP-2021) Department of Biological Sciences, The University of Tampa, 401 W. Kennedy Blvd., Tampa, FL 33606-1490, USA COMMENT Bankit Comment: ALT EMAIL:jfasick@mail.usf.edu Bankit Comment: TOTAL # OF SEQS:4 ##Assembly-Data-START## Sequencing Technology :: Sanger dideoxy sequencing ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..1104 /organism="Eubalaena glacialis" /mol_type="mRNA" /db_xref="taxon:27606" /tissue_type="retina" gene <1..>1104 /gene="Opn4" /note="Gene encoding the melanopsin pigment expressed in ipRGCs" CDS <1..>1104 /gene="Opn4" /note="Light sensitive pigment expressed in retinal ipRGCs" /codon_start=1 /product="Melanopsin" /translation="RAQAAAWVPFPTVDVPYYAHYTLGTVILLVGLSGMLGNLTVIYT FCRSRGLRTPANMFIINLAVSDFLMSFTQAPVFFASSVYKQWLFGEAGCEFYAFCGAL FGITSMITLTAIALDRYLVITRPLATVGMVSKRRAAFILLGVWLYALAWSLPPFFGWS AYVPEGLLTSCSWDYVSFMPSVRAYTMLLFCFVFFLPLLVIIYCYIFIFKAIRETGQA LQTFGASEGGGECPWQRQRLQNEWKMAKIELLVILLFVLSWAPYSTVALMGFAGYAHV LTPYMNSVPAVIAKASAIYNPIIYAITHPKYRMAIAQHLPCLGVLLGVSGQRNGLYTS YRSTHRSTLSSQALDLSWISGRRRQVSLGSESEV" BASE COUNT 178 a 366 c 301 g 259 t ORIGIN 1 agggctcagg ctgctgcctg ggtccccttt cccacggtcg atgttccata ctatgcccac 61 tacaccctgg gcacggtgat cctgctggtg gggctctcag ggatgctggg aaatctgacg 121 gtcatctata ccttctgcag gagcagaggt ctcaggacac ctgccaacat gttcatcatc 181 aacctcgcag tcagcgactt cctcatgtcc ttcacccagg cccccgtctt cttcgccagc 241 agcgtctata agcagtggct ctttggagag gcaggctgtg aattctatgc cttctgtggg 301 gctctgtttg gcatcacctc catgattacc ctgacggcca tcgccctgga ccgctacctg 361 gtgatcacac gcccactggc caccgtcggg atggtgtcca agaggcgggc ggcgtttatc 421 ctgctgggcg tctggctcta tgccctggct tggagtctgc cgcccttctt tggctggagt 481 gcctatgtgc ccgaggggct gctgacctct tgctcctggg actacgtgag cttcatgcca 541 tcggtccgcg cctacaccat gctgctcttc tgctttgtgt tcttcctccc cctgcttgtc 601 atcatctact gctacatctt catcttcaag gccatccggg agacgggcca agctctccag 661 actttcgggg ccagcgaggg tggtggtgag tgcccctggc aacggcagcg tctgcagaac 721 gagtggaaaa tggccaagat cgagctgttg gtcatccttc tcttcgtgct ctcctgggcc 781 ccctactcca ctgtggccct gatgggcttt gctgggtacg cacatgtcct gacgccctac 841 atgaactcgg tgccagctgt catcgccaag gcctctgcca tctacaaccc catcatttat 901 gccatcaccc accccaagta cagaatggcc atcgcccagc acctgccctg cctcggggtg 961 ctgctgggcg tgtcaggcca gcgcaatggc ctgtacacca gctaccgctc cacccaccgc 1021 tccacactga gcagccaggc cttggacctc agctggatct ctggacggag gcgccaggtg 1081 tccctgggct cggagagcga ggtg // LOCUS Seq2 1036 bp mRNA linear MAM 14-SEP-2021 DEFINITION Opn4, partial CDS. ACCESSION Seq2 VERSION KEYWORDS . SOURCE Megaptera novaeangliae (humpback whale) ORGANISM Megaptera novaeangliae Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Mysticeti; Balaenopteridae; Megaptera. REFERENCE 1 (bases 1 to 1036) AUTHORS Fasick,F.I., Algrain,H., Samuels,C., Mahadevan,P., Schweikert,L.E., Naffaa,Z.J. and Robinson,P.R. TITLE Spectral tuning and deactivation kinetics of marine mammal melanopsins JOURNAL unpublished REFERENCE 2 (bases 1 to 1036) AUTHORS Fasick,J.I., Samuels,C. and Naffaa,Z.J. TITLE Direct Submission JOURNAL Submitted (13-SEP-2021) Department of Biological Sciences, The University of Tampa, 401 W. Kennedy Blvd., Tampa, FL 33606-1490, USA COMMENT Bankit Comment: ALT EMAIL:jfasick@mail.usf.edu Bankit Comment: TOTAL # OF SEQS:4 ##Assembly-Data-START## Sequencing Technology :: Sanger dideoxy sequencing ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..1036 /organism="Megaptera novaeangliae" /mol_type="mRNA" /db_xref="taxon:9773" /tissue_type="retina" gene <1..>1036 /gene="Opn4" /note="Gene encoding the melanopsin pigment expressed in ipRGCs" CDS <1..>1036 /gene="Opn4" /note="Light sensitive pigment expressed in retinal ipRGCs" /codon_start=1 /product="Melanopsin" /translation="RTPANMFIINLAVSDFLMSFTQAPVFFASSVYKQWLFGEAGCEF YAFCGALFGITSMITLTAIALDRYLVITRPLATVGMVSKRRAALILLGVWLYALAWSL PPFFGWSAYVPEGLLTSCSWDYVSFMPSVRAYTMLLFCFVFFLPLLVIIYCYIFIFKA IRETGQALQTFGASEGGGECPWQRQRLQNEWKMAKIELLVILLFVLSWAPYSTVALMG FAGYAHVLTPYMNSVPAVIAKASAIYNPIIYAITHPKYRMAIAQHLPCLGVLLGVSGQ RNGLHTSYRSTHRSTLSSQASDLSWISGRRRQVSLGSESEVGWTDTEATAAWGTAQQV SGWSPCGQGPE" BASE COUNT 168 a 345 c 289 g 234 t ORIGIN 1 cggacacctg ccaacatgtt catcatcaac ctcgcagtca gcgacttcct catgtccttc 61 acccaggccc ccgtcttctt cgccagcagc gtctataagc agtggctctt tggagaggca 121 ggctgtgaat tctatgcctt ctgtggggct ctctttggca tcacctccat gattaccctg 181 acggccatcg ccctggaccg ctacctggtg atcacacgcc cactggccac cgtcgggatg 241 gtgtccaaga ggcgggcggc gcttatcctg ctgggcgtct ggctctatgc cctggcttgg 301 agtctgccgc ccttctttgg ctggagtgcc tatgtgcctg aggggctgct gacctcttgc 361 tcctgggact acgtgagctt catgccatcg gtccgcgcct acaccatgct gctcttctgc 421 tttgtgttct tcctccccct gcttgtcatc atctactgct acatcttcat cttcaaggcc 481 atccgggaga cgggccaagc tctccagact ttcggggcca gtgagggtgg tggtgagtgc 541 ccctggcaac ggcagcgtct gcagaacgag tggaaaatgg ccaagatcga gctgttggtc 601 atccttctct tcgtgctctc ctgggccccc tactccactg tggccctgat gggctttgct 661 gggtacgcac atgttctgac gccctacatg aactcggtgc cagctgtcat cgccaaggcc 721 tctgccatct acaaccccat catttatgcc atcacccacc ccaagtacag aatggccatc 781 gcccagcacc tgccctgcct cggggtgctg ctgggcgtgt caggccagcg caatggcctg 841 cacaccagct accgctccac ccaccgctcc acactgagca gccaggcctc ggacctcagc 901 tggatctctg gacggaggcg ccaggtgtcc ctgggctctg agagcgaggt gggctggaca 961 gacacggagg caacagctgc ttgggggact gcccagcaag tgagtggatg gtccccctgc 1021 ggtcagggcc cggagg // LOCUS Seq3 1349 bp mRNA linear MAM 14-SEP-2021 DEFINITION Opn4, partial CDS. ACCESSION Seq3 VERSION KEYWORDS . SOURCE Kogia sima (dwarf sperm whale) ORGANISM Kogia sima Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Physeteridae; Kogia. REFERENCE 1 (bases 1 to 1349) AUTHORS Fasick,F.I., Algrain,H., Samuels,C., Mahadevan,P., Schweikert,L.E., Naffaa,Z.J. and Robinson,P.R. TITLE Spectral tuning and deactivation kinetics of marine mammal melanopsins JOURNAL unpublished REFERENCE 2 (bases 1 to 1349) AUTHORS Fasick,J.I., Samuels,C. and Naffaa,Z.J. TITLE Direct Submission JOURNAL Submitted (13-SEP-2021) Department of Biological Sciences, The University of Tampa, 401 W. Kennedy Blvd., Tampa, FL 33606-1490, USA COMMENT Bankit Comment: ALT EMAIL:jfasick@mail.usf.edu Bankit Comment: TOTAL # OF SEQS:4 ##Assembly-Data-START## Sequencing Technology :: Sanger dideoxy sequencing ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..1349 /organism="Kogia sima" /mol_type="mRNA" /db_xref="taxon:9752" /tissue_type="retina" gene <1..>1349 /gene="Opn4" /note="Gene encoding the melanopsin pigment expressed in ipRGCs" CDS <1..>1349 /gene="Opn4" /note="Light sensitive pigment expressed in retinal ipRGCs" /codon_start=1 /product="Melanopsin" /translation="PRNSNGIATPASHSRWNSSWSSTSSLDHPPPVSPTAAXAQAAAW VPFPTVDVPAYAHYTLGTVILLVGLTGMLGNLTVIYTFCRSRGLRTPANVFIINLAVS DFLMSFTQAPVFFASSVYKQWLFGEAGCEFYAFCGALFGITSMITLTAIALDRYLVIT RPLATVGMASKRRAALVLLGVWLYALAWSLPPFFGWSAYVPEGLLTSCSWDYMSFMPS VRAYTMLLFCFVFFLPLLIIIYCYIFIFKAIRETGRALQTFGASEGAGECPWQRQRLQ NEWKMAKIELLVILLFVLSWAPYSLVALMGFAGYAHVLTPYMTSVPAVIAKASAIYNP IIYAITHPKYRMAIAQHLPCLGVLLGVSGQRTGLYTSYRSTHLSTLNSQASDLXWISG RXCQVSLGSESEVGWTDTEATAAWGTVQQVSGWYPCGQGPEDIEAKAPPKSQGQXAE" BASE COUNT 232 a 455 c 371 g 286 t 5 others ORIGIN 1 cccaggaatt ccaacggcat agccacccca gcttcccaca gcaggtggaa cagctcctgg 61 agcagcacct ccagcctgga ccaccctccg cccgtcagcc ccacggcagc nngggctcag 121 gctgctgcct gggtcccctt tcccacggtc gatgttccag cctatgccca ctacaccctg 181 ggcacggtga tcctgctggt ggggctcaca gggatgctgg gaaatctgac ggtcatctat 241 accttctgca ggagcagagg tctcaggaca cctgccaacg tgttcatcat caacctcgca 301 gtcagcgact tcctcatgtc cttcacccag gcccccgtct tcttcgccag cagcgtctat 361 aagcagtggc tctttggaga ggcaggctgt gaattctatg ccttctgtgg ggctctcttt 421 ggcatcacct ccatgattac cctgacggcc atcgccctgg accgctacct ggtgatcaca 481 cgcccactgg ccacggtcgg gatggcgtcc aagaggcggg cggcgctcgt cctgctgggc 541 gtctggctct atgccctggc ttggagtctg ccgcccttct ttggctggag tgcctatgtg 601 cccgaggggc tgctgacctc ttgctcctgg gactacatga gcttcatgcc atcggtccgc 661 gcctacacca tgctgctctt ctgctttgtg ttcttcttgc ccctgctcat catcatctac 721 tgctacatct tcatcttcaa ggccatccgg gagacgggcc gagctctcca gactttcggg 781 gccagcgagg gtgctggtga gtgcccctgg caacggcagc gtctgcagaa cgagtggaaa 841 atggccaaga tcgagctgtt ggtcatcctt ctctttgtgc tctcctgggc cccctactca 901 cttgtagccc tgatgggctt tgctgggtac gcgcatgtcc tgacgcccta catgacctcc 961 gtgccggctg tcatcgccaa ggcctctgcc atctacaacc ccatcattta tgccatcacc 1021 caccccaagt acagaatggc catcgcccag cacctgccct gcctcggggt gctgctgggc 1081 gtgtcaggcc agcgcactgg cctgtacacc agctaccgct ccacccacct ctccacactg 1141 aacagccagg cctcggacct cagntggatc tctggacggn ggtgccaggt gtccctgggc 1201 tctgagagcg aggtgggctg gacagacacg gaggcaacag ctgcttgggg aactgtccag 1261 caagtgagtg gatggtaccc ctgcggtcag ggccccgagg atatagaagc caaggcccct 1321 cccaagtccc agggacagaa ngcagagga // LOCUS Seq4 1043 bp mRNA linear MAM 14-SEP-2021 DEFINITION Opn4, partial CDS. ACCESSION Seq4 VERSION KEYWORDS . SOURCE Phocoena phocoena (harbor porpoise) ORGANISM Phocoena phocoena Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Phocoenidae; Phocoena. REFERENCE 1 (bases 1 to 1043) AUTHORS Fasick,F.I., Algrain,H., Samuels,C., Mahadevan,P., Schweikert,L.E., Naffaa,Z.J. and Robinson,P.R. TITLE Spectral tuning and deactivation kinetics of marine mammal melanopsins JOURNAL unpublished REFERENCE 2 (bases 1 to 1043) AUTHORS Fasick,J.I., Samuels,C. and Naffaa,Z.J. TITLE Direct Submission JOURNAL Submitted (13-SEP-2021) Department of Biological Sciences, The University of Tampa, 401 W. Kennedy Blvd., Tampa, FL 33606-1490, USA COMMENT Bankit Comment: ALT EMAIL:jfasick@mail.usf.edu Bankit Comment: TOTAL # OF SEQS:4 ##Assembly-Data-START## Sequencing Technology :: Sanger dideoxy sequencing ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..1043 /organism="Phocoena phocoena" /mol_type="mRNA" /db_xref="taxon:9742" /tissue_type="retina" gene <1..>1043 /gene="Opn4" /note="Gene encoding the melanopsin pigment expressed in ipRGCs" CDS <1..>1043 /gene="Opn4" /note="Light sensitive pigment expressed in retinal ipRGCs" /codon_start=1 /product="Melanopsin" /translation="GXRTPANMFIINLAVXDFLXSFTQAPVXFASSVYKQWLFGETGC EFYAFCGAVFGITSMITLTAIALDRYLVITRPLATVGMVSKRRATLVLLGVWLYALAW SLPPFFGWSAYVPEGLLTSCSWDYVSFMPSVRAYTMLLFCFVFFLPLLVIIYCYIFIF KAIRETGQALQTFGASEGGGECPWQRQRLQNEWKMAKIELLVILLFVLSWAPYSTVAL MGFAGYAHVLTPYVNSVPAVIAKASAIYNPIIYAITHPKYRMAIAQHLPCLGVLLGVS GQRTGLYTSYRFTHRSTLSSQASDLSWITGRRRQVSLGSESEVGWTDTXVTAAWGTAQ QVSGWSPCSQGPE" BASE COUNT 172 a 343 c 288 g 234 t 6 others ORIGIN 1 ggnntcagga ctcctgccaa catgttcatc atcaacctcg cagtcagnga cttcctcang 61 tccttcaccc aggcccccgt cttnttcgcc agcagcgtct ataagcagtg gctctttggg 121 gagacaggct gtgaattcta tgccttctgt ggggctgtct ttggcatcac ctccatgatt 181 actctgacgg ccatcgccct ggaccgctac ctggtgatca cacgcccact ggccaccgtc 241 gggatggtgt ccaagaggcg ggcgacgctt gtcctgctgg gcgtctggct ctatgccctg 301 gcttggagtc tgccgccctt ctttggctgg agtgcctatg tgcccgaggg gctgctgacc 361 tcttgctcct gggactacgt gagcttcatg ccatcggtcc gcgcctacac catgctgctc 421 ttctgctttg tgttcttcct ccccctgctc gtcatcatct actgctacat cttcatcttc 481 aaagccatcc gggagacagg ccaagctctc cagactttcg gggccagcga gggtggtggt 541 gagtgcccct ggcaacggca gcgtctgcag aacgagtgga aaatggccaa gatcgagctg 601 ttggtcatcc ttctcttcgt gctctcctgg gccccctact ccactgtggc cctgatgggc 661 tttgctgggt acgcacatgt cctgacgccc tacgtgaact cggtgccagc tgtcatcgcc 721 aaggcctctg ccatctacaa ccccatcatt tatgccatca cccaccccaa gtacagaatg 781 gccatcgccc agcacctgcc ctgcctcggg gtgctgctgg gcgtgtcagg ccagcgcact 841 ggcctgtaca ccagctaccg cttcacccac cgctccacac tgagcagcca ggcctcggac 901 ctcagctgga tcactggacg gaggcgccag gtgtccctgg gctctgaaag cgaggtgggc 961 tggacagaca cggangtaac agctgcttgg gggactgccc agcaagtgag tggatggtcc 1021 ccctgcagtc agggcccgga gga //