Insight into spontaneous recurrent calcium waves in a 3-D cardiac cell based on analysis of a 1-D deterministic model

dc.contributor.authorCoulibaly, Zana
dc.contributor.authorGobbert, Matthias
dc.contributor.authorPeercy, Bradford
dc.date.accessioned2025-08-13T20:14:26Z
dc.date.issued2014-05-09
dc.description.abstractCalcium dynamics in a cardiac cell are described by a system of 3-D non-linear stochastic partial differential equations. To obtain solutions that have biophysical properties, it is necessary to explore the model parameter space. To decrease the complexity of the parameter search, we reduce the 3-D stochastic model to a 1-D deterministic model. The reduction of the problem from 3-D to 1-D is done through an asymptotic approximation after non-dimensionalization and based on rational biophysical assumptions of the 3-D domain; the stochastic to deterministic transformation is based on the regular property of the 3-D solution. The result of the model reduction proves very effective in reducing the time required to get qualitative as well as quantitative information about parameter regions in the 3-D stochastic model including calcium dynamics (sparks, wave propagation, and recovery) observed in cardiac cells.
dc.description.sponsorshipThis work was supported by the IQB grant number T36GM078008. The hardware used in the computational studies is part of the UMBC High Performance Computing Facility (HPCF). The facility is supported by the U.S. National Science Foundation through the MRI program (grant nos. CNS–0821258 and CNS– 1228778) and the SCREMS program (grant no. DMS–0821311), with additional substantial support from the University of Maryland, Baltimore County (UMBC). See www.umbc.edu/hpcf for more information on HPCF and the projects using its resources. We would also like to thank to Dr. Ken Spitzer for providing us with experimental data.
dc.description.urihttps://www.tandfonline.com/doi/abs/10.1080/00207160.2014.903249
dc.format.extent20 pages
dc.genrejournal articles
dc.genrepreprints
dc.identifierdoi:10.13016/m2wcbm-2p0v
dc.identifier.citationCoulibaly, Zana, Matthias K. Gobbert, and Bradford E. Peercy. “Insight into Spontaneous Recurrent Calcium Waves in a 3-D Cardiac Cell Based on Analysis of a 1-D Deterministic Model.” International Journal of Computer Mathematics 92, no. 3 (2015): 591–607. https://doi.org/10.1080/00207160.2014.903249.
dc.identifier.urihttps://doi.org/10.1080/00207160.2014.903249
dc.identifier.urihttp://hdl.handle.net/11603/39758
dc.language.isoen
dc.publisherTaylor & Francis
dc.relation.isAvailableAtThe University of Maryland, Baltimore County (UMBC)
dc.relation.ispartofUMBC Mathematics and Statistics Department
dc.relation.ispartofUMBC Faculty Collection
dc.rightsThis is an original manuscript of an article published by Taylor & Francis in International Journal of Computer Mathematics on 2014-05-09, available at: https://doi.org/10.1080/00207160.2014.903249.
dc.subject65M60
dc.subjectcardiac cell
dc.subject92C45
dc.subject65Y05
dc.subject3-D stochastic simulation
dc.subject35K57
dc.subjectcalcium wave
dc.subject35B40
dc.subjectparallel computation
dc.subjectasymptotic approximation
dc.titleInsight into spontaneous recurrent calcium waves in a 3-D cardiac cell based on analysis of a 1-D deterministic model
dc.typeText
dcterms.creatorhttps://orcid.org/0000-0003-1745-2292
dcterms.creatorhttps://orcid.org/0000-0002-8597-2508

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