Calcium Induced Calcium Release with Stochastic Uniform Flux Density in a Heart Cell

dc.contributor.authorBrewster, M. W.
dc.contributor.authorGraf, J. S.
dc.contributor.authorHuang, X.
dc.contributor.authorCoulibaly, Z.
dc.contributor.authorGobbert, Matthias
dc.contributor.authorPeercy, B. E.
dc.date.accessioned2018-09-25T19:37:57Z
dc.date.available2018-09-25T19:37:57Z
dc.date.issued2015-07-26
dc.descriptionSummerSim '15 Proceedings of the Conference on Summer Computer Simulationen
dc.description.abstractCalcium is a critical component in many cellular functions. It serves many important functions such as signal transduction, contraction of muscles, enzyme function, and maintaining potential difference across excitable membranes. We examine the self-organization of calcium waves in a heart cell and how they propagate through the cell. Specifically, the crucial parameter of flux density that controls the amount of calcium released at each calcium release unit is assumed a known constant in the original model. In reality, this value is not known exactly, thus we design parameter studies where the flux density is made a stochastic parameter for each simulation. This technique from uncertainty quantification allows for determining the range of the flux density, in which calcium waves are likely to self-organize, but without physiologically unrealistic saturation of the cell and without electrical stimulation.en
dc.description.sponsorshipThe hardware used in the computational studies is part of the UMBC High Performance Computing Facility (HPCF). The facility is supported by the U.S. National Science Foundation through the MRI program (grant nos. CNS{0821258 and CNS{1228778) and the SCREMS program (grant no. DMS{0821311), with additional substantial support from the University of Maryland, Baltimore County (UMBC). See hpcf.umbc.edu for more information on HPCF and the projects using its resources. Co-author Brewster acknowledges support from UMBC through an Undergraduate Research Award. Co-authors Graf and Huang acknowledge support from UMBC as HPCF RAs.en
dc.description.urihttps://dl.acm.org/citation.cfm?id=2874980en
dc.format.extent6 pagesen
dc.genreconference proceeding pre-printen
dc.identifierdoi:10.13016/M2QZ22M7V
dc.identifier.citationM. W. Brewster, J. S. Graf, X. Huang, Z. Coulibaly, M. K. Gobbert, B. E. Peercy, Matthias K. Gobbert, Calcium induced calcium release with stochastic uniform flux density in a heart cell, SummerSim '15 Proceedings of the Conference on Summer Computer Simulation, Pages 1-6, https://dl.acm.org/citation.cfm?id=2874980en
dc.identifier.urihttp://hdl.handle.net/11603/11377
dc.language.isoenen
dc.publisherSociety for Computer Simulation International (SCS)en
dc.relation.isAvailableAtThe University of Maryland, Baltimore County (UMBC)
dc.relation.ispartofUMBC Mathematics Department Collection
dc.rightsThis item is likely protected under Title 17 of the U.S. Copyright Law. Unless on a Creative Commons license, for uses protected by Copyright Law, contact the copyright holder or the author.
dc.subjectCalcium Induced Calcium Release (CICR)en
dc.subjectcalcium wavesen
dc.subjectheart cellen
dc.subjectuncertainty quantification (UQ)en
dc.subjectUMBC High Performance Computing Facility (HPCF)en
dc.titleCalcium Induced Calcium Release with Stochastic Uniform Flux Density in a Heart Cellen
dc.typeTexten

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