Using flux theory in dynamic omics data sets to identify differentially changing signals using DPoP
| dc.contributor.author | Edwards, Harley | |
| dc.contributor.author | Zavorskas, Joseph | |
| dc.contributor.author | Huso, Walker | |
| dc.contributor.author | Doan, Alexander G. | |
| dc.contributor.author | Silbiger, Caton | |
| dc.contributor.author | Harris, Steven | |
| dc.contributor.author | Srivastava, Ranjan | |
| dc.contributor.author | Marten, Mark | |
| dc.date.accessioned | 2025-07-09T17:55:24Z | |
| dc.date.issued | 2024-9-27 | |
| dc.description.abstract | Derivative profiling is a novel approach to identify differential signals from dynamic omics data sets. This approach applies variable step-size differentiation to time dynamic omics data. This work assumes that there is a general omics derivative that is a useful and descriptive feature of dynamic omics experiments. We assert that this omics derivative, or omics flux, is a valuable descriptor that can be used instead of, or with, fold change calculations. | |
| dc.description.sponsorship | This material is based upon work supported by the National Science Foundation under Grant No. 2006189. Any opinions, fndings, and conclusions or recommendations expressed in this material are those of the authors and do not necessarily refect the views of the National Science Foundation | |
| dc.description.uri | https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-024-05938-9 | |
| dc.format.extent | 20 pages | |
| dc.genre | journal articles | |
| dc.identifier | doi:10.13016/m29mps-ptlv | |
| dc.identifier.citation | Harley Edwards et al., “Using Flux Theory in Dynamic Omics Data Sets to Identify Differentially Changing Signals Using DPoP,” BMC Bioinformatics 25, no. 1 (September 27, 2024): 312, https://doi.org/10.1186/s12859-024-05938-9. | |
| dc.identifier.uri | https://doi.org/10.1186/s12859-024-05938-9 | |
| dc.identifier.uri | http://hdl.handle.net/11603/39308 | |
| dc.language.iso | en_US | |
| dc.publisher | Springer Nature | |
| dc.relation.isAvailableAt | The University of Maryland, Baltimore County (UMBC) | |
| dc.relation.ispartof | UMBC Faculty Collection | |
| dc.relation.ispartof | UMBC Student Collection | |
| dc.relation.ispartof | UMBC Chemical, Biochemical & Environmental Engineering Department | |
| dc.rights | Attribution-NonCommercial-NoDerivatives 4.0 International | |
| dc.rights.uri | https://creativecommons.org/licenses/by-nc-nd/4.0/ | |
| dc.subject | Differential signal identification | |
| dc.subject | Proteomic | |
| dc.subject | Time series analysis | |
| dc.subject | Phosphoproteomic | |
| dc.subject | Transcriptomic | |
| dc.subject | Dynamic omics analysis | |
| dc.title | Using flux theory in dynamic omics data sets to identify differentially changing signals using DPoP | |
| dc.type | Text | |
| dcterms.creator | https://orcid.org/0000-0003-4110-1687 | |
| dcterms.creator | https://orcid.org/0009-0008-6972-1865 | |
| dcterms.creator | https://orcid.org/0000-0002-1863-8956 |
